API for gCMAPWeb
A web interface for gene-set enrichment analyses

Global functions
ImagePlot Source code
addLinks Man page Source code
add_geneScores_to_df Man page Source code
alias2entrez Source code
body_first Man page Source code
cmap-data Man page
cmap1 Man page
cmap2 Man page
cmap3 Man page
cmap4 Man page
cmap5 Man page
cmapAnalysis Man page Source code
cmapHeatmap Man page Source code
cmapRun Man page
cmapRun,CMAPCollection,CMAPCollection-method Man page
cmapRun,CMAPCollection,eSet-method Man page
cmapRun,GeneSet,CMAPCollection-method Man page
cmapRun,GeneSet,eSet-method Man page
cmapRun,SignedGeneSet,eSet-method Man page
cmapRun,eSet,CMAPCollection-method Man page
cmapRun,eSet,eSet-method Man page
conversion_html Man page Source code
convert_gene_identifiers Man page Source code
create_GeneIdentifierType Man page Source code
create_GeneSet Man page Source code
create_SignedGeneSet Man page Source code
create_figure_legend Man page Source code
create_gene_report Man page Source code
create_gene_table_legend Man page Source code
create_heatmap_legend Man page Source code
create_legend Man page Source code
create_overview_legend Man page Source code
create_overview_plot Man page Source code
create_profile_ExpressionSet Man page Source code
create_query_objects Man page Source code
create_tab Man page Source code
create_zip Man page Source code
entrez2symbol Source code
entrez_GeneSets Man page Source code
exampleCMAP Man page Source code
examplePost Man page Source code
gCMAPWeb Man page Source code
gCMAPWeb-package Man page
gene.set.density Source code
gene_density_chart_legend Man page Source code
gene_density_profile_legend Man page Source code
gene_pie_chart_legend Man page Source code
gene_score_density Source code
gene_set.pie Source code
generate_report Man page Source code
hide_species_js Man page Source code
html_body_last Man page Source code
html_header Man page Source code
html_table Man page Source code
identifier_radio_html Man page Source code
index_message Man page Source code
index_quote Man page Source code
index_subtitle Man page Source code
index_text Man page Source code
index_title Man page Source code
inputType_buttons Man page Source code
load_cmaps Man page Source code
overview.density Source code
overview.heatmap Source code
parse_file_input Man page Source code
parse_request Man page Source code
parse_textarea_input Man page Source code
platform_radio_html Man page Source code
probe2entrez Source code
process_score_input Man page Source code
profile_input_example Man page Source code
read_config_file Man page Source code
reference_radio_html Man page Source code
retrieve_annotation Man page Source code
signed_input_example Man page Source code
single_input_example Man page Source code
species_radio_html Man page Source code
stripPrefix Man page Source code
unsigned_input_example Man page Source code
validate_config_file Man page Source code
validate_request Man page Source code
gCMAPWeb documentation built on Nov. 17, 2017, 12:30 p.m.