conversion_html: Identifier conversion html output

In gCMAPWeb: A web interface for gene-set enrichment analyses

Description

This function formats a data.frame with the results of the gene identifier conversion to html code, including an interactive dataTable. The html page is saved to disk and the path to the output file is returned as a character string.

Usage

conversion_html(df, result.dir, file.name, tmp_filename, url.base = NULL,
  message = NULL)

Arguments

df	data.frame with old / new gene identifiers
result.dir	character, path to result directory
file.name	character, output filename
tmp_filename	character, name of the session-specific subdirectory
url.base	character, path to htdocs directory (optional)
message	character, optional message to display above the result table

Value

character, name of the output html file

Author(s)

Thomas Sandmann

gCMAPWeb documentation built on April 28, 2020, 8:23 p.m.