Identifier conversion html output

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Description

This function formats a data.frame with the results of the gene identifier conversion to html code, including an interactive dataTable. The html page is saved to disk and the path to the output file is returned as a character string.

Usage

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conversion_html(df, result.dir, file.name, tmp_filename, url.base = NULL,
  message = NULL)

Arguments

df

data.frame with old / new gene identifiers

result.dir

character, path to result directory

file.name

character, output filename

tmp_filename

character, name of the session-specific subdirectory

url.base

character, path to htdocs directory (optional)

message

character, optional message to display above the result table

Value

character, name of the output html file

Author(s)

Thomas Sandmann

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