gespeR: Gene-Specific Phenotype EstimatoR

Estimates gene-specific phenotypes from off-target confounded RNAi screens. The phenotype of each siRNA is modeled based on on-targeted and off-targeted genes, using a regularized linear regression model.

Package details

AuthorFabian Schmich
Bioconductor views CellBasedAssays GeneTarget ImmunoOncology Preprocessing Regression Visualization
MaintainerFabian Schmich <fabian.schmich@bsse.ethz.ch>
LicenseGPL-3
Version1.22.0
URL http://www.cbg.ethz.ch/software/gespeR
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gespeR")

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gespeR documentation built on Nov. 8, 2020, 5:35 p.m.