ggcyto: Visualize Cytometry data with ggplot

With the dedicated fortify method implemented for flowSet, ncdfFlowSet and GatingSet classes, both raw and gated flow cytometry data can be plotted directly with ggplot. ggcyto wrapper and some customed layers also make it easy to add gates and population statistics to the plot.

Package details

AuthorMike Jiang
Bioconductor views CellBasedAssays FlowCytometry ImmunoOncology Infrastructure Visualization
MaintainerMike Jiang <wjiang2@fhcrc.org>,Jake Wagner <jpwagner@fhcrc.org>
LicenseArtistic-2.0
Version1.18.0
URL https://github.com/RGLab/ggcyto/issues
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ggcyto")

Try the ggcyto package in your browser

Any scripts or data that you put into this service are public.

ggcyto documentation built on Nov. 8, 2020, 5:30 p.m.