equivClust2pdf: Save the graphical representation of objects of class...

In goProfiles: goProfiles: an R package for the statistical analysis of functional profiles

Description

Save the graphical representation of objects of class equivClust or iterEquivClust as pdf files.

Usage

equivClust2pdf(x, ...)

## S3 method for class 'equivClust'
equivClust2pdf(x, jobName, ylab, ...)

## S3 method for class 'iterEquivClust'
equivClust2pdf(x, jobName, ylab, ...)

Arguments

x	an object of class equivClust or iterEquivClust
...	additional arguments to function pdf
jobName	character, main plot title and file name (it should be correct as a file name!)
ylab	character, label of the plot vertical axis

Methods (by class)

• equivClust: equivClust2pdf method for class equivClust

• iterEquivClust: equivClust2pdf method for class iterEquivClust

Examples

data(clustKidneyMF2)
equivClust2pdf(clustKidneyMF2)
# And then open file "Equivalence cluster_MF_2_complete.pdf"...
equivClust2pdf(clustKidneyMF2, 
               jobName = "Method 'complete' dendrogram for level 2 of GO ontology MF")
# And then open file "Method 'complete' dendrogram for level 2 of GO ontology MF.pdf"...

goProfiles documentation built on Nov. 8, 2020, 8:12 p.m.