mergeProfilesLists: Combines two lists of profiles into one

In goProfiles: goProfiles: an R package for the statistical analysis of functional profiles

Description

Combines two lists of profiles, that is two lists with three components, 'MF', 'BP', 'CC' into a single one.

Usage

mergeProfilesLists(profilesList1, profilesList2, emptyCats = F, profNames = NULL)

Arguments

profilesList1	First list to combine
profilesList2	Second list to combine
emptyCats	Boolean. Set to TRUE if there are empty categories that should be accounted for in any of the profiles
profNames	Names for the profiles (optional). If missing they are set to 'Frequency-1', 'Frequency-2',etc.

Value

A list of profiles with more than one column each.

Author(s)

Alex Sanchez

Examples

require(goProfiles)
data(prostateIds)
welsh.MF <- basicProfile (welsh01EntrezIDs[1:100], onto="MF", level=2, orgPackage="org.Hs.eg.db") 
singh.MF <- basicProfile (singh01EntrezIDs[1:100], onto="MF", level=2, orgPackage="org.Hs.eg.db") 
plotProfiles(welsh.MF,'Functional profiles for Welsh dataset',percentage=TRUE)
welsh.singh.MF <-mergeProfilesLists(welsh.MF, singh.MF, profNames=c("Welsh", "Singh"))

goProfiles documentation built on Nov. 8, 2020, 8:12 p.m.