CD4ids: Entrez identifiers for CD4-TCells example

In goProfiles: goProfiles: an R package for the statistical analysis of functional profiles

Description

This dataset contains the entrez identifiers CD4EntrezIds and their associated GO Terms CD4GOTermsFrame and CD4GOTermsList corresponding to the list of differentially expressed genes in a study by Henkel et al.

Usage

data(CD4Ids)

Source

Hengel, R.L. and Thaker, V. and Pavlick, M.V. and Metcalf, J.A. and Dennis, G. Jr. and Yang, J. and Lempicki, R.A. and Sereti, I. and Lane, H.C. (2003). L-selectin (CD62L) expression distinguishes small resting memory CD4+ T cells that preferentially respond to recall antigen. J. Immunol., 170, 28-32. (2003)

Examples

data(CD4Ids)

Example output

Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following object is masked from 'package:base':

    expand.grid

Loading required package: GO.db

goProfiles documentation built on Nov. 8, 2020, 8:12 p.m.