countMappableReadsInInterval: countMappableReadsInInterval counts the number of mappable...

Description Usage Arguments Value Author(s)

Description

Supports parallel processing using mclapply in the 'parallel' package. To change the number of processors, use the argument 'mc.cores'.

Usage

1

Arguments

features

A GRanges object representing a set of genomic coordinates. The meta-plot will be centered on the start position.

UnMap

List object representing the position of un-mappable reads. Default: not used.

debug

If set to TRUE, provides additional print options. Default: FALSE

...

Extra argument passed to mclapply

Value

Returns a vector of counts, each representing the number of reads inside each genomic interval.

Author(s)

Charles G. Danko and Minho Chae



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