countMappableReadsInInterval: countMappableReadsInInterval counts the number of mappable...

Description Usage Arguments Value Author(s)

View source: R/limitToXkb.R

Description

Supports parallel processing using mclapply in the 'parallel' package. To change the number of processors, use the argument 'mc.cores'.

Usage

1

Arguments

features

A GRanges object representing a set of genomic coordinates. The meta-plot will be centered on the start position.

UnMap

List object representing the position of un-mappable reads. Default: not used.

debug

If set to TRUE, provides additional print options. Default: FALSE

...

Extra argument passed to mclapply

Value

Returns a vector of counts, each representing the number of reads inside each genomic interval.

Author(s)

Charles G. Danko and Minho Chae



groHMM documentation built on May 20, 2017, 9:31 p.m.
Search within the groHMM package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.