Files in hapFabia
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data
NEWS
NAMESPACE
DESCRIPTION
cleanup
build/vignette.rds
src/Makevars.win
src/vcftoFABIAB.c
src/Makevars
src/split_sparse_matrixB.c
src/interfaceR.c
src/commandLine/vcftoFABIA.c
src/commandLine/split_sparse_matrix.c
data/hapRes.RData
data/chr1ASW1000G.RData
data/mergedIBDsegmentList.RData
data/simu.RData
data/res.RData
R/AllGenerics.R
R/methods-Factorization-class.R
R/zzz.R
R/AllClasses.R
R/methods-IBDsegment-class.R
R/hapFabia.R
R/methods-IBDsegmentList-class.R
vignettes/hapfabia.Rnw
vignettes/bioinf-article.txi
vignettes/natbib.sty
vignettes/ibd.bib
vignettes/natbib.bst
vignettes/bioinf-bar.png
vignettes/bioinf.cls
vignettes/figures/vectors_new.pdf
vignettes/figures/pedi.pdf
vignettes/figures/example1.pdf
vignettes/figures/plotB1.pdf
vignettes/figures/example8.pdf
man/compareIBDsegmentLists.Rd
man/matrixPlot.Rd
man/hapFabia.Rd
man/extractIBDsegments.Rd
man/plotIBDsegment.Rd
man/simu.Rd
man/hapFabiaVersion.Rd
man/iterateIntervals.Rd
man/res.Rd
man/mergedIBDsegmentList.Rd
man/hapRes.Rd
man/sim.Rd
man/setStatistics.Rd
man/mergeIBDsegmentLists.Rd
man/analyzeIBDsegments.Rd
man/split_sparse_matrix.Rd
man/makePipelineFile.Rd
man/IBDsegmentList-class.Rd
man/IBDsegmentList2excel.Rd
man/simulateIBDsegmentsFabia.Rd
man/findDenseRegions.Rd
man/chr1ASW1000G.Rd
man/toolsFactorizationClass.Rd
man/simulateIBDsegments.Rd
man/setAnnotation.Rd
man/IBDsegment-class.Rd
man/identifyDuplicates.Rd
man/vcftoFABIA.Rd
inst/CITATION
inst/doc/hapfabia.Rnw
inst/doc/hapfabia.pdf
inst/doc/hapfabia.R
inst/pipeline/pipeline.R
