Files in hapFabia
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data

NEWS
NAMESPACE
DESCRIPTION
cleanup
build/vignette.rds
src/Makevars.win
src/vcftoFABIAB.c
src/Makevars
src/split_sparse_matrixB.c
src/interfaceR.c
src/commandLine/vcftoFABIA.c
src/commandLine/split_sparse_matrix.c
data/hapRes.RData
data/chr1ASW1000G.RData
data/mergedIBDsegmentList.RData
data/simu.RData
data/res.RData
R/AllGenerics.R R/methods-Factorization-class.R R/zzz.R R/AllClasses.R R/methods-IBDsegment-class.R R/hapFabia.R R/methods-IBDsegmentList-class.R
vignettes/hapfabia.Rnw
vignettes/bioinf-article.txi
vignettes/natbib.sty
vignettes/ibd.bib
vignettes/natbib.bst
vignettes/bioinf-bar.png
vignettes/bioinf.cls
vignettes/figures/vectors_new.pdf vignettes/figures/pedi.pdf vignettes/figures/example1.pdf vignettes/figures/plotB1.pdf vignettes/figures/example8.pdf man/compareIBDsegmentLists.Rd man/matrixPlot.Rd man/hapFabia.Rd man/extractIBDsegments.Rd man/plotIBDsegment.Rd man/simu.Rd man/hapFabiaVersion.Rd man/iterateIntervals.Rd man/res.Rd man/mergedIBDsegmentList.Rd man/hapRes.Rd man/sim.Rd man/setStatistics.Rd man/mergeIBDsegmentLists.Rd man/analyzeIBDsegments.Rd man/split_sparse_matrix.Rd man/makePipelineFile.Rd man/IBDsegmentList-class.Rd man/IBDsegmentList2excel.Rd man/simulateIBDsegmentsFabia.Rd man/findDenseRegions.Rd man/chr1ASW1000G.Rd man/toolsFactorizationClass.Rd man/simulateIBDsegments.Rd man/setAnnotation.Rd man/IBDsegment-class.Rd man/identifyDuplicates.Rd man/vcftoFABIA.Rd
inst/CITATION
inst/doc/hapfabia.Rnw
inst/doc/hapfabia.pdf inst/doc/hapfabia.R inst/pipeline/pipeline.R
hapFabia documentation built on Nov. 8, 2020, 5:17 p.m.