path_vals: Pathways matrix of the BRCA gene expression dataset

Description Usage Format Details Value

Description

Matrix of pathway activation values for the BRCA dataset. This matrix is extracted from the Results object returned by the hipathia function by means of the get_paths_matrix function.

Usage

1

Format

Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.

Details

path_vals <- get_paths_matrix(results)

Value

Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.


hipathia documentation built on Nov. 8, 2020, 7:52 p.m.