path_vals: Pathways matrix of the BRCA gene expression dataset
In hipathia: HiPathia: High-throughput Pathway Analysis
Description
Usage
Format
Details
Value
Description
Matrix of pathway activation values for the BRCA dataset. This matrix is
extracted from the Results object returned by the hipathia function
by means of the get_paths_matrix function.
Usage
1
Format
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs
and column names are the TCGA identifyers of the samples.
Details
path_vals <- get_paths_matrix(results)
Value
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs
and column names are the TCGA identifyers of the samples.
hipathia documentation built on Nov. 8, 2020, 7:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Details Value
Description
Matrix of pathway activation values for the BRCA dataset. This matrix is
extracted from the Results object returned by the hipathia function
by means of the get_paths_matrix function.
Usage
1 |
Format
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.
Details
path_vals <- get_paths_matrix(results)
Value
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.