installCellPicker: Set up imageHTS web modules
In imageHTS: Analysis of high-throughput microscopy-based screens

Description Usage Arguments Details Value Author(s) See Also Examples

installCellPicker and installWebQuery install the cellPicker and webQuery modules in the local project directory.

cellPicker is a web application that allows the interactive selection/annotation of cells within images using a point-and-click web interface.

webQuery is a web application that allows to query information from the screen by well and well annotation. The webQuery module requires a web server and PHP to be installed.

1 2	installCellPicker(x) installWebQuery(x)

`x`	An imageHTS object.

After installation, the cellPicker module can be used with the function popCellPicker.

x must be annotated using annotate before using installWebQuery. After installation, the webQuery module can be used with the function popWebQuery.

None.

Gregoire Pau, gregoire.pau@embl.de, 2010

popCellPicker, popWebQuery

## initialize imageHTS object using the local submorph screen
local = tempdir()
server = system.file('submorph', package='imageHTS')
x = parseImageConf('conf/imageconf.txt', localPath=local, serverURL=server)
x = annotate(x, 'conf/annotation.txt')

installCellPicker(x)
installWebQuery(x)