imageHTS: Analysis of high-throughput microscopy-based screens

imageHTS is an R package dedicated to the analysis of high-throughput microscopy-based screens. The package provides a modular and extensible framework to segment cells, extract quantitative cell features, predict cell types and browse screen data through web interfaces. Designed to operate in distributed environments, imageHTS provides a standardized access to remote data and facilitates the dissemination of high-throughput microscopy-based datasets.

Package details

AuthorGregoire Pau, Xian Zhang, Michael Boutros, Wolfgang Huber
Bioconductor views CellBasedAssays ImmunoOncology Preprocessing Software Visualization
MaintainerJoseph Barry <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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imageHTS documentation built on Nov. 8, 2020, 8:29 p.m.