selectRefSp: Automated selection of a reference spectrum

In mQTL.NMR: Metabolomic Quantitative Trait Locus Mapping for 1H NMR data

Description

The selection of reference spectrum among all spectrums is based on the highest similarity to all other spectra

Usage

selectRefSp(X, step)

Arguments

X	matrix of spectra
step	a numerical parameter used to scale spectral regions down to specific bin size

Value

returns the index of selected spectrum

Author(s)

Lyamine Hedjazi

See Also

alignSp

Examples

# Data

Sp=matrix(rnorm(10*5000,mean=0,sd=1), nrow=10,ncol=5000)

# Reference spectrum selection

step=0.02 # Recursion step (default 0.02)
index<-selectRefSp(Sp,step)

mQTL.NMR documentation built on Nov. 1, 2018, 2:13 a.m.