Files in mQTL.NMR

Metabolomic Quantitative Trait Locus Mapping for 1H NMR data

DESCRIPTION

NAMESPACE

inst/CITATION.Rd

inst/doc/mQTLUse.Rnw

inst/doc/FAQ.Rnw

inst/doc/mQTLUse.R inst/doc/FAQ.R inst/doc/mQTLUse.pdf inst/doc/FAQ.pdf

inst/extdata/humanMap.map

inst/extdata/rectangle_SRV.ppm

inst/extdata/genofile.txt

inst/extdata/covarFile.txt

inst/extdata/hreducedF.txt

inst/extdata/human.pheno.txt

inst/extdata/results.rda

inst/extdata/human.geno.ped

inst/extdata/physiodat.txt

inst/extdata/phenofile.txt

inst/extdata/reducedF.txt

vignettes/mQTLUse.Rnw

vignettes/FilesFormat.png

vignettes/FAQ.Rnw

vignettes/CSVSFilesFormat.png

R/validatePeaks.R R/align_mQTL.R R/read.cross.gary.R R/validateSegments.R R/trapeze.R R/summarize.R R/SRV.plot.R R/recurAlign.R R/psave.R R/attachSegments.R R/getgenomelength.R R/setupRSPA.R R/arrow.plot.R R/alignSp.R R/drop_outliers.R R/segmentateSp.R R/shift.R R/segmentate.R R/Plot_summary.R R/locationtocircle.R R/panel.cor.R R/msea.R R/set_baseline.R R/circlelocations.R R/sgolayDeriv.R R/pinv.R R/drawspline.R R/process_mGWA.R R/getchromosomelength.R R/matchSegments.R R/ppersp.R R/findMid.R R/format_mGWA.R R/UVscaled.R R/normalise.R R/configureRSPA.R R/format_mQTL.R R/localRecurAlign.R R/get_central_pos.R R/running.R R/locationtoaxis.R R/panel.hist.R R/comparePeaks.R R/SRV_lod.plot.R R/getAmpThr.R R/post_mQTL.R R/diff_res.R R/peakPeaks.R R/Top_SRV.plot.R R/process_mQTL.R R/drawcirculargenome.R R/simple.plot.R R/load_demo_data.R R/corrcoef_aligned.R R/Centered.R R/pplot.R R/FFTcorr.R R/sgolay.R R/summary_mQTL.R R/zeroPad.R R/SRV.R R/ppmToPt.R R/NMR.plot.R R/unite_segments.R R/pre_mQTL.R R/normalise_mQTL.R R/load_datafiles.R R/circle_mQTL.R R/getCorellation.R R/run_QTL.R R/rectangle.R R/add_peak.R R/selectRefSp.R R/drawstraightmetabolome.R man/process_mQTL.Rd man/post_mQTL.Rd man/align_mQTL.Rd man/SRV.Rd man/setupRSPA.Rd man/sgolay.Rd man/peakPeaks.Rd man/load_demo_data.Rd man/pplot.Rd man/SRV_lod.plot.Rd man/normalise.Rd man/circle_mQTL.Rd man/segmentateSp.Rd man/format_mGWA.Rd man/matchSegments.Rd man/load_datafiles.Rd man/normalise_mQTL.Rd man/pre_mQTL.Rd man/mQTL.NMR-package.Rd man/summary_mQTL.Rd man/Top_SRV.plot.Rd man/SRV.plot.Rd man/simple.plot.Rd man/ppersp.Rd man/configureRSPA.Rd man/format_mQTL.Rd man/sgolayDeriv.Rd man/alignSp.Rd man/process_mGWA.Rd man/selectRefSp.Rd man/attachSegments.Rd

build/vignette.rds

mQTL.NMR documentation built on Nov. 1, 2018, 2:13 a.m.