Description Arguments Value Slots Author(s)
An S4 class to represent the parameters for PLS-DA analysis
para |
A metaXpara object |
value |
New value |
A object of plsDAPara
scale
The method used to scale the data,
see preProcess
in metaX
center
A logical which indicates if the matrix should be mean centred or not
t
The method used to transform the data,
see transformation
in metaX
validation
The method for validation, default is "CV"
ncomp
The number of components used for PLS-DA, default is 2
nperm
The number of permutations, default is 200
kfold
The number of folds for cross-validation, default is 7
do
A logical which indicates whether to do the plsDA analysis, default is TRUE
method
The method used in PLS-DA. See plsr
in pls
cpu
The number of cpus used, default is all cpus.
Bo Wen wenbo@genomics.cn
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