make_mgdb_sqlite: make_mgdb_sqlite

Description Usage Arguments Value Examples

View source: R/mgDb-class.R

Description

make_mgdb_sqlite

Usage

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make_mgdb_sqlite(db_name, db_file, taxa_tbl, seqs)

Arguments

db_name

reference database name

db_file

file path for sqlite database

taxa_tbl

data frame with database taxonomy data

seqs

database sequences, path to fasta file or DNAStringSet object

Value

writes SQLite file

Examples

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## Not run: 
make_mgdb_sqlite(db_name = "greengenes13.8_85",
    db_file = db_file,
    taxa_tbl = taxa_tbl,
    seqs = seqs)

## End(Not run)

metagenomeFeatures documentation built on May 2, 2018, 4:13 a.m.