Man pages for methVisual
Methods for visualization and statistics on DNA methylation data
| cgInAlign | Amount of CpGs |
| cgMethFinder | Methylation status |
| Cooccurrence | Visualization of binary methylation data |
| coversionGenom | Sequence conversion |
| findNonAligned | Aligned CpG positions |
| heatMapMeth | HeatMap diagram over methylation data |
| makeDataMethGFF | GFF methylation files |
| makeLocalExpDir | Saving example data |
| makeTabFilePath | Tab delimited text file |
| matrixSNP | Correlation between methylation states |
| MethAlignNW | Summary of methylation states |
| methCA | CA on methylation |
| methData | BiQAnalyzer dataset |
| MethDataInput | Sequences match control |
| methFisherTest | Fisher exact Test on methylation Data |
| MethLollipops | "Lollipops" Methylation plot |
| methWhitneyUTest | Mann Whitney U-Test on methylation data |
| MethylQC | Quality controle (QC) on Methylation Data |
| plotAbsMethyl | Plot number mathylation on CpGs positions |
| plotMatrixSNP | Plot of methylation states dependencies |
| readBisulfFASTA | Read multiple FASTA file |
| selectRefSeq | Uploading genomic sequence |
