findNonAligned: Aligned CpG positions
In methVisual: Methods for visualization and statistics on DNA methylation data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Determination of non-aligned CpG positions
Usage
1
Arguments
methData
List; contains information on the pairwise alignments, and methylated CpG motifs
Details
Determination of aligned and not-aligned positions of CpGs of examined sequences in relation to genomic sequence.
Value
Integer matrix, where columns=CpG positions, row=clone sequences. 0 = not methylated, 1 = methylated, 2 = not aligned
Author(s)
Arie Zackay <arie.zackay@mail.huji.ac.il>, Christine Steinhoff <steinhof@molgen.mpg.de>
Examples
1
2
methVisual documentation built on April 28, 2020, 7:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) Examples
Description
Determination of non-aligned CpG positions
Usage
1 |
Arguments
methData |
List; contains information on the pairwise alignments, and methylated CpG motifs |
Details
Determination of aligned and not-aligned positions of CpGs of examined sequences in relation to genomic sequence.
Value
Integer matrix, where columns=CpG positions, row=clone sequences. 0 = not methylated, 1 = methylated, 2 = not aligned
Author(s)
Arie Zackay <arie.zackay@mail.huji.ac.il>, Christine Steinhoff <steinhof@molgen.mpg.de>
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.