samplesForTransgenerationalAnalysis: All samples information, formated by 'methylKit', in a...

Description Usage Format Details Value See Also Examples

Description

The object is a list with 3 entries. Each entry corresponds to the information for one generation (first entry = first generation, etc..) stored in a methylRawList. There are 12 samples (6 controls and 6 cases) for each generation. Each sample information is stored in a methylRaw object.

Usage

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Format

A list containing three methylRawList objects. Each methylRawList contains the information for one generation (first entry = first generation, etc..). Each sample information is stored in a methylRaw object. There is methylRaw objects (6 controls and 6 cases) in each generation.

Details

This dataset can be used to test the runPermutation function.

Value

A list containing three methylRawList objects. Each methylRawList contains the information for one generation (first entry = first generation, etc..). Each sample information is stored in a methylRaw object. There is methylRaw objects (6 controls and 6 cases) in each generation.

See Also

Examples

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## Loading dataset
data(samplesForTransgenerationalAnalysis)

## Run a permutation analysis
runPermutation(methylKitData = samplesForTransgenerationalAnalysis,
    type = "tiles", nbrPermutations = 2, vSeed = 2332)

methylInheritance documentation built on April 29, 2020, 5:22 a.m.