Description Usage Arguments Value Author(s) Examples

View source: R/methylInheritanceInternalMethods.R

Validation of some parameters needed by the public
`mergePermutationAndObservation`

function.

1 2 | ```
validateMergePermutationAndObservation(permutationResults,
observationResults)
``` |

`permutationResults` |
a |

`observationResults` |
a |

`0`

indicating that all parameters validations have been
successful.

Astrid Deschenes

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 | ```
## Create a observation result
observed <- list()
observed[["OBSERVATION"]] <- list()
observed[["OBSERVATION"]][["SITES"]] <- list()
observed[["OBSERVATION"]][["SITES"]][["i2"]] <- list(HYPER = list(11, 10),
HYPO = list(13, 12))
observed[["OBSERVATION"]][["SITES"]][["iAll"]] <- list(HYPER = list(1),
HYPO = list(3))
## Create a permutation result containing only 1 permutation result
## Real perumtations results would have more entries
permutated <- list()
permutated[["PERMUTATION"]] <- list()
permutated[["PERMUTATION"]][[1]] <- list()
permutated[["PERMUTATION"]][[1]][["SITES"]] <- list()
permutated[["PERMUTATION"]][[1]][["SITES"]][["i2"]] <- list(HYPER =
list(11, 12), HYPO = list(8, 11))
permutated[["PERMUTATION"]][[1]][["SITES"]][["iAll"]] <- list(HYPER =
list(0), HYPO = list(1))
## Merge permutation and observation results
methylInheritance:::validateMergePermutationAndObservation(
permutationResults = permutated, observationResults = observed)
## The function raises an error when at least one paramater is not valid
## Not run: methylInheritance:::validateMergePermutationAndObservation(
permutationResults = permutated, observationResults = NULL)
## End(Not run)
``` |

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