getDBPath-methods: Get path to database of the methylDB objects

Description Usage Arguments Examples

Description

The function returns the path to the flat file database that stores the data of the methylRawDB, methylRawListDB, methylBaseDB or methylDiffDB objects.

Usage

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getDBPath(x)

## S4 method for signature 'methylRawListDB'
getDBPath(x)

## S4 method for signature 'methylBaseDB'
getDBPath(x)

## S4 method for signature 'methylRawDB'
getDBPath(x)

## S4 method for signature 'methylDiffDB'
getDBPath(x)

Arguments

x

an methylBaseDB,methylRawDB, methylRawListDB or methylDiffDB object

Examples

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data(methylKit)

methylBaseDB.obj <- unite(methylRawList.obj,save.db=TRUE,dbdir="methylDB")


#The path to the database is returned
getDBPath(methylBaseDB.obj)


# remove Database again
rm(methylBaseDB.obj)
unlink("methylDB",recursive=TRUE)

methylKit documentation built on Jan. 30, 2021, 2 a.m.