readMethylDB-methods: load tabix file with header to methylDB
In methylKit: DNA methylation analysis from high-throughput bisulfite sequencing results
Description
Usage
Arguments
Details
Value
Examples
Description
load tabix file with header to methylDB
Usage
1
readMethylDB(dbpath)
Arguments
dbpath
path to a tabix file with header
Details
The function reads the header from a given tabix file and
loads it into corresponding methylDB object.
Value
an methylBaseDB,methylRawDB,
methylRawListDB or an methylDiffDB object
Examples
1
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## Not run:
data(methylKit)
baseDB.obj <- makeMethylDB(methylBase.obj,"my/path")
mydbpath <- getDBPath(baseDB.obj)
rm(baseDB.obj)
readMethylDB(mydbpath)
## End(Not run)
methylKit documentation built on Jan. 30, 2021, 2 a.m.
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Description Usage Arguments Details Value Examples
Description
load tabix file with header to methylDB
Usage
1 | readMethylDB(dbpath)
|
Arguments
dbpath |
path to a tabix file with header |
Details
The function reads the header from a given tabix file and loads it into corresponding methylDB object.
Value
an methylBaseDB,methylRawDB,
methylRawListDB or an methylDiffDB object
Examples
1 2 3 4 5 6 7 8 9 10 | ## Not run:
data(methylKit)
baseDB.obj <- makeMethylDB(methylBase.obj,"my/path")
mydbpath <- getDBPath(baseDB.obj)
rm(baseDB.obj)
readMethylDB(mydbpath)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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