Files in mgsa
Model-based gene set analysis

CHANGES
DESCRIPTION
NAMESPACE
R
R/MgsaGoSets-class.R R/MgsaResults-class.R R/MgsaSets-class.R R/dottedTable.R R/mgsa-methods.R R/mgsa-package.R R/zzz.R README.md
acinclude.m4
aclocal.m4
build
build/vignette.rds
cleanup
configure
configure.ac
data
data/example.rda
inst
inst/doc
inst/doc/mgsa.R
inst/doc/mgsa.Rnw
inst/doc/mgsa.pdf
inst/example_files
inst/example_files/gene_association_head.sgd
man
man/MgsaGoSets-class.Rd man/MgsaMcmcResults-class.Rd man/MgsaResults-class.Rd man/MgsaSets-class.Rd man/alphaMcmcPost-methods.Rd man/alphaPost-methods.Rd man/betaMcmcPost-methods.Rd man/betaPost-methods.Rd man/createMgsaGoSets.Rd man/example-go.Rd man/example-o.Rd man/itemAnnotations-methods.Rd man/itemIndices-methods.Rd man/length-methods.Rd man/mgsa-methods.Rd man/mgsa-package.Rd man/nsamples-methods.Rd man/pMcmcPost-methods.Rd man/pPost-methods.Rd man/plot-MgsaResults-method.Rd man/populationSize-methods.Rd man/readGAF.Rd man/restarts-methods.Rd man/setAnnotations-methods.Rd man/setsMcmcPost-methods.Rd man/setsResults-methods.Rd man/show-MgsaResults-method.Rd man/show-MgsaSets-method.Rd man/steps-methods.Rd man/studySetSizeInPopulation-methods.Rd man/subMgsaSets-methods.Rd
script
script/README
script/TODO
script/buildman.sh
script/demo.R script/test.R script/test2.R script/test_GO.R script/test_signature.R script/vignette_quick_example.R
src
src/Makevars.in
src/mgsa-core.c
src/mgsa-core.h
src/mgsa.c
src/mt.c
src/mt.h
src/mt19937p
src/mt19937p/example-mt.c
src/mt19937p/mt19937p.c
src/mt19937p/mt19937p.h
tests
tests/testthat
tests/testthat.R
tests/testthat/gene_association_head.goa_ref_human.gz
tests/testthat/test-mgsa.R tests/testthat/test-readGAF.R tests/testthat/test-subMgsaSets.R
vignettes
vignettes/mgsa.Rnw
mgsa documentation built on May 31, 2017, 11:31 a.m.