create_sbs96_table: Uses a genome object to find context and generate standard...
In musicatk: Mutational Signature Comprehensive Analysis Toolkit
Description
Usage
Arguments
Value
View source: R/standard_tables.R
Description
Uses a genome object to find context and generate standard SBS96 tables
Usage
1
create_sbs96_table(musica, g, overwrite = FALSE)
Arguments
musica
A musica object.
g
A BSgenome object indicating which genome
reference the variants and their coordinates were derived from.
overwrite
Overwrite existing count table
Value
Returns the created SBS96 count table object
musicatk documentation built on Nov. 8, 2020, 5:16 p.m.
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Description Usage Arguments Value
View source: R/standard_tables.R
Description
Uses a genome object to find context and generate standard SBS96 tables
Usage
1 | create_sbs96_table(musica, g, overwrite = FALSE)
|
Arguments
musica |
A |
g |
A BSgenome object indicating which genome reference the variants and their coordinates were derived from. |
overwrite |
Overwrite existing count table |
Value
Returns the created SBS96 count table object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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