index_reorder: Force index order of phyloseq objects
In phyloseq: Handling and analysis of high-throughput microbiome census data
Description
Usage
Arguments
Examples
Description
Force index order of phyloseq objects
Usage
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index_reorder(ps, index_type)
## S4 method for signature 'phyloseq'
index_reorder(ps, index_type = "both")
Arguments
ps
(Required). A phyloseq-class instance.
index_type
(Optional). A character string
specifying the indices to properly order.
Supported values are c("both", "taxa", "samples").
Default is "both", meaning samples and taxa indices
will be checked/re-ordered.
Examples
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## data("GlobalPatterns")
## GP = index_reorder(GlobalPatterns)
Example output
phyloseq documentation built on Nov. 8, 2020, 6:41 p.m.
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Description Usage Arguments Examples
Description
Force index order of phyloseq objects
Usage
1 2 3 4 | index_reorder(ps, index_type)
## S4 method for signature 'phyloseq'
index_reorder(ps, index_type = "both")
|
Arguments
ps |
(Required). A |
index_type |
(Optional). A character string
specifying the indices to properly order.
Supported values are |
Examples
1 2 | ## data("GlobalPatterns")
## GP = index_reorder(GlobalPatterns)
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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