geneCopyNum: Gene copy number data in chromosome 17
In pint: Pairwise INTegration of functional genomics data
Description
Usage
Format
Source
Description
Preprocessed gene copy number (aCGH) data for 51 patients in
chromosome 17.
Usage
1
data(chromosome17)
Format
A list which contain the following data:
- data
gene copy number data in matrix form. Genes are in
columns and samples in rows
- info
Data frame which contains following information about
genes in data matrix.
- chr
Factor indicating the chrosome for the gene (1 to 23, or X
or Y
- arm
Factor indicating the chromosomal arm for the gene
('p' or 'q')
- loc
Location of the gene in base pairs.
Source
Integrated gene copy number and expression microarray analysis
of gastric cancer highlights potential target genes. Myllykangas et
al., International Journal of Cancer, vol. 123,
no. 4, pp. 817–25, 2008.
pint documentation built on Oct. 31, 2019, 2:41 a.m.
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Description Usage Format Source
Description
Preprocessed gene copy number (aCGH) data for 51 patients in chromosome 17.
Usage
1 | data(chromosome17)
|
Format
A list which contain the following data:
- data
gene copy number data in matrix form. Genes are in columns and samples in rows
- info
Data frame which contains following information about genes in data matrix.
- chr
Factor indicating the chrosome for the gene (1 to 23, or X or Y
- arm
Factor indicating the chromosomal arm for the gene ('p' or 'q')
- loc
Location of the gene in base pairs.
Source
Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes. Myllykangas et al., International Journal of Cancer, vol. 123, no. 4, pp. 817–25, 2008.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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