pint: Pairwise INTegration of functional genomics data

Pairwise data integration for functional genomics, including tools for DNA/RNA/miRNA dependency screens.

AuthorOlli-Pekka Huovilainen <ohuovila@gmail.com> and Leo Lahti <leo.lahti@iki.fi>
Date of publicationNone
MaintainerOlli-Pekka Huovilainen <ohuovila@gmail.com>
LicenseBSD_2_clause + file LICENSE
Version1.24.0
https://github.com/antagomir/pint

View on Bioconductor

Files in this package

pint/DESCRIPTION
pint/LICENSE
pint/NAMESPACE
pint/R
pint/R/AllClasses.R pint/R/AllGenerics.R pint/R/ChromosomeModels-accessors.R pint/R/GeneDependencyModel-accessors.R pint/R/GenomeModels-accessors.R pint/R/W.effects.R pint/R/calculate.arm.R pint/R/calculate.arm.sparse.R pint/R/calculate.chr.R pint/R/calculate.chr.sparse.R pint/R/calculate.genome.R pint/R/calculate.genome.sparse.R pint/R/centerData.R pint/R/firstlib.R pint/R/fit.cgh.mir.byname.R pint/R/fit.cgh.mrna.byname.R pint/R/fixed.window.R pint/R/imputation.R pint/R/iterative.window.R pint/R/pick.chr.arm.R pint/R/pint.data.R pint/R/pint.match.R pint/R/plot-methods.R pint/R/report.R pint/R/screen.cgh.mir.R pint/R/screen.cgh.mrna.R pint/R/show-methods.R pint/R/sparse.window.R pint/R/test.segmented.R pint/R/z.effects.R
pint/README.md
pint/build
pint/build/vignette.rds
pint/data
pint/data/chromosome17.RData
pint/inst
pint/inst/CITATION
pint/inst/NEWS
pint/inst/doc
pint/inst/doc/depsearch.R
pint/inst/doc/depsearch.Rnw
pint/inst/doc/depsearch.pdf
pint/man
pint/man/ChromosomeModels-class.Rd pint/man/GeneDependencyModel-class.Rd pint/man/GenomeModels-class.Rd pint/man/fit.byname.Rd pint/man/geneCopyNum.Rd pint/man/geneExp.Rd pint/man/get.neighboring.probes.Rd pint/man/get.neighs.Rd pint/man/join.top.regions.Rd pint/man/order.feature.info.Rd pint/man/pint.data.Rd pint/man/plot.Rd pint/man/screen.Rd pint/man/summarize.region.parameters.Rd pint/man/window.Rd pint/man/z.effect.Rd
pint/vignettes
pint/vignettes/cca2.eps
pint/vignettes/cca2.png
pint/vignettes/depsearch-003.eps
pint/vignettes/depsearch-005.eps
pint/vignettes/depsearch.Rnw
pint/vignettes/depsearch.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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