reverse_complement: reverse-complement some fragments
In polyester: Simulate RNA-seq reads
Description
Usage
Arguments
Value
Examples
View source: R/reverse_complement.R
Description
randomly reverse-complement half of the sequences in a DNAStringSet
Usage
1
reverse_complement(tObj, seed = NULL)
Arguments
tObj
DNAStringSet representing sequences.
seed
optional seed to set before randomly selecting the sequences to
be reverse-complemented.
Value
DNAStringSet that is the same as tObj, but with about half
the sequences reverse-complemented.
Examples
1
2
3
library(Biostrings)
data(srPhiX174)
srPhiX174_halfrc = reverse_complement(srPhiX174, seed=174)
polyester documentation built on Nov. 8, 2020, 8:09 p.m.
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Description Usage Arguments Value Examples
View source: R/reverse_complement.R
Description
randomly reverse-complement half of the sequences in a DNAStringSet
Usage
1 | reverse_complement(tObj, seed = NULL)
|
Arguments
tObj |
DNAStringSet representing sequences. |
seed |
optional seed to set before randomly selecting the sequences to be reverse-complemented. |
Value
DNAStringSet that is the same as tObj, but with about half
the sequences reverse-complemented.
Examples
1 2 3 | library(Biostrings)
data(srPhiX174)
srPhiX174_halfrc = reverse_complement(srPhiX174, seed=174)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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