pqsfinder: Identification of potential quadruplex forming sequences
Version 1.4.9

The main functionality of this package is to detect DNA sequence patterns that are likely to fold into an intramolecular G-quadruplex (G4). Unlike many other approaches, this package is able to detect sequences responsible for G4s folded from imperfect G-runs containing bulges or mismatches and as such is more sensitive than competing algorithms.

Package details

AuthorJiri Hon, Matej Lexa and Tomas Martinek
Bioconductor views GeneRegulation MotifDiscovery SequenceMatching
MaintainerJiri Hon <jiri.hon@gmail.com>
LicenseBSD_2_clause + file LICENSE
Version1.4.9
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("pqsfinder")

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pqsfinder documentation built on June 21, 2017, 2:01 a.m.