numOfFactorsToUse: Determine number of factors to use from an ExpressionSet
In puma: Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0)
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
This is really an internal function used to determine how many factors to use in design and contrast matrices
Usage
1
numOfFactorsToUse(eset)
Arguments
eset
An object of class
ExpressionSet.
Value
An integer denoting the number of factors to be used.
Author(s)
Richard D. Pearson
See Also
Related methods createDesignMatrix and createContrastMatrix
Examples
1
2
3
4
5
6
7
8
9
if(FALSE){
# Next 4 lines commented out to save time in package checks, and saved version used
# if (require(affydata)) {
# data(Dilution)
# eset_mmgmos <- mmgmos(Dilution)
# }
data(eset_mmgmos)
numOfFactorsToUse(eset_mmgmos)
}
puma documentation built on Nov. 8, 2020, 11:08 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
This is really an internal function used to determine how many factors to use in design and contrast matrices
Usage
1 | numOfFactorsToUse(eset)
|
Arguments
eset |
An object of class
|
Value
An integer denoting the number of factors to be used.
Author(s)
Richard D. Pearson
See Also
Related methods createDesignMatrix and createContrastMatrix
Examples
1 2 3 4 5 6 7 8 9 | if(FALSE){
# Next 4 lines commented out to save time in package checks, and saved version used
# if (require(affydata)) {
# data(Dilution)
# eset_mmgmos <- mmgmos(Dilution)
# }
data(eset_mmgmos)
numOfFactorsToUse(eset_mmgmos)
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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