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scoreInvHap can get the samples' inversion status of known inversions. scoreInvHap uses SNP data as input and requires the following information about the inversion: genotype frequencies in the different haplotypes, R2 between the region SNPs and inversion status and heterozygote genotypes in the reference. The package include this data for 21 inversions.
Package details |
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Author | Carlos Ruiz [aut, cre], Dolors Pelegrí-Sisó [aut], Juan R. Gonzalez [aut] |
Bioconductor views | Genetics GenomicVariation SNP |
Maintainer | Carlos Ruiz <carlos.ruiz@isglobal.org> |
License | file LICENSE |
Version | 1.12.1 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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