API for scsR
SiRNA correction for seed mediated off-target effect
| Global functions | |
|---|---|
| .pooled_weightened_mean | Source code |
| OPIrsa | Man page Source code |
| OPIrsaScore | Man page Source code |
| add_rank_col | Man page Source code |
| add_seed | Man page Source code |
| benchmark_shared_hits | Man page Source code |
| bydf | Man page Source code |
| bydfa | Man page Source code |
| check_consistency | Man page Source code |
| compare_sorted_geneSets | Man page |
| create_sd_matrix | Man page Source code |
| delColDf | Man page Source code |
| delete_undefined_rows | Man page Source code |
| enrichment_geneSet | Man page Source code |
| enrichment_heatmap | Man page Source code |
| get_sd_quant | Man page Source code |
| get_seed_oligos_df | Man page Source code |
| intersectAll | Man page Source code |
| launch_RSA | Man page Source code |
| median_replicates | Man page Source code |
| miRBase_20 | Man page |
| plot_effective_seeds_head | Man page Source code |
| plot_screen_hits | Man page Source code |
| plot_screen_seeds_count | Man page Source code |
| plot_seed_score_sd | Man page Source code |
| plot_seeds_oligo_count | Man page Source code |
| randomSortOnVal | Man page Source code |
| randomizeInner | Man page |
| removeSharedOffTargets | Man page Source code |
| renameColDf | Man page Source code |
| replace_non_null_elements | Man page Source code |
| seed_correction | Man page Source code |
| seed_correction_pooled | Man page Source code |
| seed_removal | Man page Source code |
| seeds_analysis | Man page Source code |
| sortInner | Man page Source code |
| split_df | Man page Source code |
| transcribe_seqs | Man page Source code |
| uuk_screen | Man page |
| uuk_screen_dh | Man page |
