Files in scsR
SiRNA correction for seed mediated off-target effect
NAMESPACE
DESCRIPTION
build/vignette.rds
data/miRBase_20.rda
data/datalist
data/uuk_screen_dh.rda
data/uuk_screen.rda
R/scsR_utils.R
R/scsR_plots.R
R/scsR.R
vignettes/uuk_benchmark_sh.pdf
vignettes/uuk_benchmark_sh_pooled.pdf
vignettes/screen_hits.pdf
vignettes/effective_seeds_head1.pdf
vignettes/seed_score_sd.pdf
vignettes/screen_seeds_count1.pdf
vignettes/uuk_enrichment_heatmap.pdf
vignettes/scsR.Rnw
vignettes/screen_hits_seed_removal.pdf
vignettes/uuk_enrichment_heatmap_pooled.pdf
vignettes/screen_hits_corrected.pdf
vignettes/seeds_oligo_count1.pdf
man/intersectAll.Rd
man/enrichment_geneSet.Rd
man/delete_undefined_rows.Rd
man/plot_seeds_methods.Rd
man/transcribe_seqs.Rd
man/randomSortOnVal.Rd
man/removeSharedOffTargets.Rd
man/add_seed.Rd
man/compare_sorted_geneSets.Rd
man/miRBase_20.Rd
man/renameColDf.Rd
man/get_sd_quant.Rd
man/enrichment_heatmap.Rd
man/seed_correction.Rd
man/uuk_screen_dh.Rd
man/add_rank_col.Rd
man/create_sd_matrix.Rd
man/seed_correction_pooled.Rd
man/OPIrsa.Rd
man/get_seed_oligos_df.Rd
man/sortInner.Rd
man/split_df.Rd
man/bydf.Rd
man/seeds_analysis.Rd
man/randomizeInner.Rd
man/uuk_screen.Rd
man/plot_screen_hits.Rd
man/median_replicates.Rd
man/launch_RSA.Rd
man/delColDf.Rd
man/benchmark_shared_hits.Rd
man/OPIrsaScore.Rd
man/seed_removal.Rd
man/replace_non_null_elements.Rd
man/check_consistency.Rd
inst/doc/scsR.Rnw
inst/doc/scsR.pdf
inst/doc/scsR.R
