transcribe_seqs: transcribe_seqs

In scsR: SiRNA correction for seed mediated off-target effect

Description

transcribe the sequences that are present in a specific column of the input data frame

Usage

transcribe_seqs(df, seqColName="siRNA_seq", toDNA=FALSE, progress_bar=FALSE)

Arguments

df	input data frame.
seqColName	name of the column that contains the sequences (character vector) ( each sequence must be in the format of a character vector, i.e. a simple string)
toDNA	choose whether to transcribe to DNA (i.e. put T instead of U) (boolean)
progress_bar	choose whether disable printing warnings/messages. (boolean)

Value

data frame given in input, but with the sequences transcribed.

Author(s)

Andrea Franceschini

Examples

	data(uuk_screen)

	input_screen = head(uuk_screen, n=10)
	uuk_screen_transcribed = transcribe_seqs(input_screen)

scsR documentation built on April 28, 2020, 7:11 p.m.