API for sigaR
Statistics for Integrative Genomics Analyses in R

Global functions
.RCMloss-method Man page
CNGEheatmaps Man page Source code
ExpressionSet2order Man page Source code
ExpressionSet2subset Man page Source code
ExpressionSet2weightedSubset Man page Source code
R2.stat Source code
RCMestimation Man page Source code
RCMrandom Man page
RCMrandom,rcmFit-method Man page
RCMrandom-method Man page
RCMtest Man page Source code
alphabivariate Source code
alphaest Source code
cghCall2cghSeg Man page Source code
cghCall2maximumSubset Man page Source code Source code
cghCall2order Man page Source code
cghCall2subset Man page Source code
cghCall2weightedSubset Man page Source code
cghSeg2order Man page Source code
cghSeg2subset Man page Source code
cghSeg2weightedSubset Man page Source code
cisEffectPlot Man page Source code
cisEffectTable Man page Source code
cisEffectTest Man page Source code
cisEffectTune Man page Source code
cisTest-class Man page
countdiscoveries Source code
countth Source code
countth.eff Source code
covMatConstruction Source code
datareduce Source code
entTest-class Man page
entropyTest Man page Source code
expandMatching2singleIDs Man page Source code
find.cgh.reg.data Source code
getSegFeatures Man page Source code
hdEntropy Man page Source code
hdMI Man page Source code
lambda.per.reg Source code
makeSegments Source code
matchAnn2Ann Man page Source code
matchCGHcall2ExpressionSet Man page Source code
matrixRows2list Source code
merge2ExpressionSets Man page Source code
merge2cghCalls Man page Source code
miTest-class Man page
minDistCghFeature_CGHcall2ExpressionSet Source code
minDistFeature Source code
mutInfTest Man page Source code
nBreakpoints Man page Source code
nulldist.all.wcvm Source code
nulldist.all.wmw Source code
overlapPercentage Source code
overlapPercentage_CGHcall2ExpressionSet Source code
overlapPlusInterpolation_CGHcall2ExpressionSet Source code
pathway1sample Man page Source code
pathway2sample Man page Source code
pathwayFit-class Man page
pathwayPlot Man page Source code
pi0est Source code
pollackCN16 Man page
pollackGE16 Man page
powerunbalance Source code
pretest Source code
prob.test.stats Source code
probs2calls Source code
profilesPlot Man page Source code
pval.perm.marg Source code
pvalbound Source code
rawps Source code
rcmFit-class Man page
rcmTest-class Man page
redraw Source code
redrawcol Source code
shift.est Source code
shrin.an.prob Source code
shrin.an.wcvm Source code
sigaR Man page
sigaR-package Man page
slhFuncCombineFeatureNames Source code
slhFuncMaxCGHcallData Source code
slhFuncWeightedCGHcallExpressionSetAnnotation Source code
slhFuncWeightedCGHcallExpressionSetData Source code
slhFunctMaxFeatures Source code
splitMatchingAtBreakpoints Man page Source code
summary,ANY-method Man page
summary,entTest-method Man page
summary,miTest-method Man page
summary,rcmFit-method Man page
summary,rcmTest-method Man page
summary-method Man page
tuning Source code
uni.an.prob Source code
uni.an.wcvm Source code
uniqGenomicInfo Man page Source code
wcvm.test.stats Source code
wmw.test.stats Source code
sigaR documentation built on Nov. 1, 2018, 4:30 a.m.