Files in sigaR
Statistics for Integrative Genomics Analyses in R
NAMESPACE
DESCRIPTION
build/vignette.rds
data/pollackGE16.rda
data/pollackCN16.rda
R/plotFunctions.r
R/classDefinitions.r
R/pathwayFunctions.R
R/rcmFunctions.r
R/entropyFunctions.r
R/private.R
R/cisEffectFunctions.R
R/dataManagementFunctions.r
R/privateCisEffectFunctions.R
vignettes/sigaR.Rnw
vignettes/statisticalUnit.pdf
man/cghCall2order.Rd
man/ExpressionSet2order.Rd
man/pathwayPlot.Rd
man/sigaR-package.Rd
man/pathway2sample.Rd
man/miTest-class.Rd
man/pollackCN16.Rd
man/rcmTest-class.Rd
man/cisTest-class.Rd
man/pollackGE16.Rd
man/cghSeg2order.Rd
man/cisEffectTest.Rd
man/cghCall2weightedSubset.Rd
man/merge2cghCalls.Rd
man/ExpressionSet2weightedSubset.Rd
man/getSegFeatures.Rd
man/RCMrandom-method.Rd
man/hdEntropy.Rd
man/RCMestimation.Rd
man/pathway1sample.Rd
man/cghCall2maximumSubset.Rd
man/splitMatchingAtBreakpoints.Rd
man/profilesPlot.Rd
man/rcmFit-class.Rd
man/hdMI.Rd
man/entTest-class.Rd
man/cghCall2subset.Rd
man/ExpressionSet2subset.Rd
man/matchCGHcall2ExpressionSet.Rd
man/cisEffectPlot.Rd
man/pathwayFit-class.Rd
man/entropyTest.Rd
man/uniqGenomicInfo.Rd
man/expandMatching2singleIDs.Rd
man/RCMrandom.Rd
man/summary-method.Rd
man/CNGEheatmaps.Rd
man/cghSeg2weightedSubset.Rd
man/cghCall2cghSeg.Rd
man/z.RCMloss-method.Rd
man/cghSeg2subset.Rd
man/merge2ExpressionSets.Rd
man/cisEffectTable.Rd
man/nBreakpoints.Rd
man/matchAnn2Ann.Rd
man/mutInfTest.Rd
man/RCMtest.Rd
man/cisEffectTune.Rd
inst/CITATION
inst/doc/sigaR.pdf
inst/doc/sigaR.R
inst/doc/sigaR.Rnw
