SpliceExprSet-class: Class "SpliceExprSet"

In splicegear: splicegear

Description

A class to store probe expression values with alternative splicing information

Objects from the Class

Objects can be created by calls of the form new("SpliceExprSet", ...).

Slots

spliceSites:

Object of class "SpliceSites". The probes and splice site information.

probes:

Object of class "Probes". The matching expression values.

eset:

Object of class "ExpressionSet". The matching expression values.

Methods

grid.plot

signature(x = "SpliceExprSet", y = "missing"): ...

plot

signature(x = "SpliceExprSet", y = "missing"): a ploting method.

show

signature(object = "SpliceExprSet"): a printing method.

spliceSites

signature(object = "SpliceExprSet"): accessor.

Author(s)

[e-mail]

References

a manuscript in preparation

See Also

as.data.frame.SpliceExprSet, sort.SpliceExprSet and SpliceSites-class

Examples

data(eset, package="splicegear")
data(probes, package="splicegear")
data(spsites, package="splicegear")

spliceset <- new("SpliceExprSet", eset=eset,
                       probes=probes, spliceSites=spsites)

plot(spliceset)

splicegear documentation built on Oct. 31, 2019, 7:40 a.m.