barplot.SpliceSites: barplot for SpliceSites
In splicegear: splicegear

Description Usage Arguments Details Value See Also Examples

Displays a barplot of the associated AnnotatedDataFrame.

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## S3 method for class 'SpliceSites'
barplot(height, type.as = c("typeI", "typeII", "all"),
                    info = "tissue", ...)

`height`	object of class `SpliceSites-class`.
`type.as`	the type of alternative splicing (see `SpliteSites-class` for further details).
`info`	the name of the covariate in the AnnotatedDataFrame (see details).
`...`	optional parameters to be passed to the underlying function `barplot`.

When the objects are built from the XML format we propose as an exchange, the parameter info can at least take the values "tissue" and "histology". One can refer to the slots spsiteIpos.pData and spsiteIIpos.pData to know what are the possible choices.

See the value returned by the function barplot.

SpliceSites-class, barplot