Nothing
tests/testthat/test_no_tx2gene.R
In tximport: Import and summarize transcript-level estimates for transcript- and gene-level analysis
context("no_tx2gene")
test_that("no tx2gene provided throws error", {
dir <- system.file("extdata", package="tximportData")
samples <- read.table(file.path(dir,"samples.txt"), header=TRUE)
files <- file.path(dir,"salmon", samples$run, "quant.sf.gz")
names(files) <- paste0("sample",1:6)
expect_error(tximport(files, type="salmon", txOut=FALSE))
})
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tximport documentation built on Nov. 8, 2020, 8:20 p.m.
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context("no_tx2gene")
test_that("no tx2gene provided throws error", {
dir <- system.file("extdata", package="tximportData")
samples <- read.table(file.path(dir,"samples.txt"), header=TRUE)
files <- file.path(dir,"salmon", samples$run, "quant.sf.gz")
names(files) <- paste0("sample",1:6)
expect_error(tximport(files, type="salmon", txOut=FALSE))
})
Try the tximport package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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