Files in ActivePathways
Integrative Pathway Enrichment Analysis of Multivariate Omics Data
MD5
NEWS.md
NAMESPACE
DESCRIPTION
R/merge_p.r
R/gmt.r
R/ActivePathways.r
R/cytoscape.r
R/statistical_tests.r
inst/doc/ActivePathways-vignette.Rmd
inst/doc/ActivePathways-vignette.R
inst/doc/ActivePathways-vignette.html
inst/extdata/Adenocarcinoma_scores_subset.tsv
inst/extdata/Differential_expression_rna_protein.tsv
inst/extdata/enrichmentMap__pathways.txt
inst/extdata/enrichmentMap__pathways.gmt
inst/extdata/enrichmentMap__legend.pdf
inst/extdata/hsapiens_REAC_subset2.gmt
inst/extdata/enrichmentMap__subgroups.txt
inst/extdata/hsapiens_REAC_subset.gmt
build/vignette.rds
tests/testthat.R
tests/testthat/test_validation.r
tests/testthat/test_data_rna_protein.tsv
tests/testthat/test_columnSignificance.r
tests/testthat/test_enrichmentAnalysis.r
tests/testthat/test_data.txt
tests/testthat/test_columnContribution.r
tests/testthat/test_export_CSV.r
tests/testthat/test_orderedHypergeometric.r
tests/testthat/test_merge_p_values.r
tests/testthat/helper.r
tests/testthat/test.gmt
tests/testthat/test_return.r
tests/testthat/test_cytoscape.r
tests/testthat/hsapiens_REAC_subset.gmt
vignettes/NetworkStep1_V2.png
vignettes/border_line_type.jpg
vignettes/set_aesthetic.jpg
vignettes/PropertiesDropDown2_V2.png
vignettes/LegendView_RColorBrewer.png
vignettes/CreateEnrichmentMapDialogue_V2.png
vignettes/StylePanel_V2.png
vignettes/LegendView.png
vignettes/new_map.png
vignettes/ActivePathways-vignette.Rmd
vignettes/ImportStep_V2.png
vignettes/lineplot_tutorial.png
vignettes/NetworkStep2_V2.png
vignettes/legend.png
vignettes/LegendView_Custom.png
man/DPM.Rd
man/brownsMethod.Rd
man/merge_p_values.Rd
man/GMT.Rd
man/enrichmentAnalysis.Rd
man/hypergeometric.Rd
man/makeBackground.Rd
man/export_as_CSV.Rd
man/prepareCytoscape.Rd
man/columnSignificance.Rd
man/orderedHypergeometric.Rd
man/ActivePathways.Rd
