initSelectionCategories: initSelectionCategories
In AnaCoDa: Analysis of Codon Data under Stationarity using a Bayesian Framework
Description
Method of Parameter class (access via parameter$<function name>, where parameter is an object initialized by initializeParameterObject). Initialize values for selection CSP. File should be of comma-separated with header. Three columns should be of order Amino_acid,Codon,Value
Arguments
files
list of files containing starting values. Number of files should equal the number of categories.
numCategories
number of mutation categories (should be less than or equal to number of mixtures)
fix
Can use this parameter to fix selection at current values (won't change over course of MCMC run)
AnaCoDa documentation built on Jan. 8, 2021, 2:37 a.m.
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Description
Method of Parameter class (access via parameter$<function name>, where parameter is an object initialized by initializeParameterObject). Initialize values for selection CSP. File should be of comma-separated with header. Three columns should be of order Amino_acid,Codon,Value
Arguments
files |
list of files containing starting values. Number of files should equal the number of categories. |
numCategories |
number of mutation categories (should be less than or equal to number of mixtures) |
fix |
Can use this parameter to fix selection at current values (won't change over course of MCMC run) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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