Function for calculated the substrate concentration for every organism

Share:

Description

The generic function getSublb calculates the substrate concentration for every individual in the environment based on their x and y position.

Usage

1
2
3
4
getSublb(object)

## S4 method for signature 'Arena'
getSublb(object)

Arguments

object

An object of class Arena.

Value

Returns the substrate concentration for every individual in the environment with substrates as well as x and y positions as columns and rows for each organism.

See Also

Arena-class

Examples

1
2
3
4
5
6
7
data(Ec_core, envir = environment()) #get Escherichia coli core metabolic model
bac <- Bac(Ec_core,deathrate=0.05,
           minweight=0.05,growtype="exponential") #initialize a bacterium
arena <- Arena(n=20,m=20) #initialize the environment
arena <- addOrg(arena,bac,amount=10) #add 10 organisms
arena <- addSubs(arena,40) #add all possible substances
sublb <- getSublb(arena)

Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.