plot.by.segreg.type: Draw a graphic showing the number of markers of each...

In BatchMap: Software for the Creation of High Density Linkage Maps in Outcrossing Species

Description

The function receives an object of class onemap. For outcrossing populations, it can show detailed information (all 18 possible categories), or a simplified version.

Usage

## S3 method for class 'by.segreg.type'
plot(x, subcateg = TRUE, ...)

Arguments

x	an object of class onemap
subcateg	a TRUE/FALSE option to indicate if results will be plotted showing all possible categories (only for outcrossing populations)
...	Not used

Value

a ggplot graphic

Examples

data(example.out) #Outcrossing data
plot.by.segreg.type(example.out)
plot.by.segreg.type(example.out, subcateg=FALSE)

# You can store the graphic in an object, then save it.
# For details, see the help of ggplot2's function ggsave()
data(example.out) #Outcrossing data
g <- plot.by.segreg.type(example.out)
ggsave("SegregationTypes.jpg", g, width=7, height=4, dpi=600)

BatchMap documentation built on May 2, 2019, 3:45 p.m.