cellcycle: Mammalian cell cycle network

In BoolNet: Construction, Simulation and Analysis of Boolean Networks

Mammalian cell cycle network

Description

The mammalian cell cycle network as described by Faure et al.

Usage

data(cellcycle)

Details

The data consists of a variable cellcycle of class BooleanNetwork with 10 genes describing the four phases of the mammalian cell cycle. The network has one steady-state attractor. Furthermore, it has one synchronous attractor with 7 states and one asynchronous complex/loose attractor with 112 states. The class BooleanNetwork is described in more detail in loadNetwork.

Source

A. Faure, A. Naldi, C. Chaouiya and D. Thieffry (2006), Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle. Bioinformatics 22(14):e124–e131.

Examples

data(cellcycle)

# the network is stored in a variable called 'cellcycle'
print(cellcycle)

BoolNet documentation built on Oct. 2, 2023, 5:08 p.m.