Files in BoolNet
Construction, Simulation and Analysis of Boolean Networks

MD5
DESCRIPTION
NAMESPACE
inst/CITATION
inst/NEWS.Rd
inst/doc/BoolNet_package_vignette.Snw.pdf
inst/doc/example.btp
inst/doc/BoolNet_package_vignette.Snw.Rnw
inst/doc/cellcycle.txt
inst/doc/BoolNet_package_vignette.Snw.R
vignettes/biotap_initval.png
vignettes/biotap_logic.png
vignettes/BoolNet_package_vignette.bib
vignettes/biotap_sim_properties.png
vignettes/pajek.png
vignettes/BoolNet_package_vignette.Snw.Rnw
vignettes/biotap_model.png
R/loadNetwork.R R/truthTableToSymbolic.R R/sequenceToLaTeX.R R/simplifyNetwork.R R/simulateSymbolicModel.R R/perturbTrajectories.R R/getStateSummary.R R/zeta.R R/chooseNetwork.R R/binarizeTimeSeries.R R/plotPBNTransitions.R R/symbolicToTruthTable.R R/testNetworkProperties.R R/loadSBML.R R/fixGenes.R R/parseBooleanFunction.R R/attractorsToLaTeX.R R/getBasinOfAttraction.R R/generateTimeSeries.R R/toPajek.R R/getTransitionProbabilities.R R/print.BooleanStateInfo.R R/loadBioTapestry.R R/print.MarkovSimulation.R R/reconstructNetwork.R R/plotNetworkWiring.R R/plotAttractors.R R/perturbNetwork.R R/print.SymbolicBooleanNetwork.R R/stateTransition.R R/generateRandomNKNetwork.R R/print.AttractorInfo.R R/scanStatistic.R R/print.BooleanNetwork.R R/getTransitionTable.R R/getAttractorSequence.R R/print.SymbolicSimulation.R R/saveNetwork.R R/getPathToAttractor.R R/plotSequence.R R/generateState.R R/print.ProbabilisticBooleanNetwork.R R/toSBML.R R/generateRandomStartStates.R R/edgeDetector.R R/plotStateGraph.R R/helpers.R R/print.TransitionTable.R R/markovSimulation.R R/getAttractors.R
src/reconstruct_network.c
src/random.h
src/picosat.h
src/probabilistic_boolean_network.c
src/uthash.h
src/Makevars.win
src/common.c
src/init.c
src/attractor_info.c
src/attractor_search_interface.c
src/symbolic_network.h
src/boolean_network.h
src/symbolic_network.c
src/statespace_search.c
src/common.h
src/sat_search.c
src/statespace_search.h
src/attractor_info.h
src/sat_search.h
src/picosat.c
src/symbolic_simulator.c
man/saveNetwork.Rd man/generateTimeSeries.Rd man/print.MarkovSimulation.Rd man/testNetworkProperties.Rd man/binarizeTimeSeries.Rd man/getTransitionTable.Rd man/generateState.Rd man/truthTableToSymbolic.Rd man/getAttractorSequence.Rd man/getBasinOfAttraction.Rd man/fixGenes.Rd man/toSBML.Rd man/print.BooleanNetwork.Rd man/simplifyNetwork.Rd man/toPajek.Rd man/print.AttractorInfo.Rd man/simulateSymbolicModel.Rd man/plotSequence.Rd man/yeastTimeSeries.Rd man/getAttractors.Rd man/loadNetwork.Rd man/markovSimulation.Rd man/loadSBML.Rd man/loadBioTapestry.Rd man/igf.Rd man/stateTransition.Rd man/print.TransitionTable.Rd man/getTransitionProbabilities.Rd man/print.ProbabilisticBooleanNetwork.Rd man/getPathToAttractor.Rd man/examplePBN.Rd man/reconstructNetwork.Rd man/chooseNetwork.Rd man/plotAttractors.Rd man/attractorsToLaTeX.Rd man/symbolicToTruthTable.Rd man/plotNetworkWiring.Rd man/perturbNetwork.Rd man/plotPBNTransitions.Rd man/BoolNet-package.Rd man/sequenceToLaTeX.Rd man/generateRandomNKNetwork.Rd man/perturbTrajectories.Rd man/cellcycle.Rd man/generationFunctions.Rd man/plotStateGraph.Rd man/getStateSummary.Rd man/print.SymbolicSimulation.Rd
build/vignette.rds
data/yeastTimeSeries.rda
data/igf.rda
data/cellcycle.rda
data/examplePBN.rda
BoolNet documentation built on May 2, 2019, 2:51 p.m.