API for BoolNet
Construction, Simulation and Analysis of Boolean Networks

Global functions
.internal.getTransitionTable Source code
BoolNet Man page
BoolNet-package Man page
Gb Source code
Gini Source code
MathMLFromParseTree Source code
adjustGeneNames Source code
allcombn Source code
attractorsToLaTeX Man page
b Source code
bin2dec Source code
binarizeTimeSeries Man page Source code
canonicalStateOrder Source code
cellcycle Man page
check.integer Source code
checkNullPointer Source code
chooseNetwork Man page Source code
dec2bin Source code
dzeta Source code
edgeDetector Source code
examplePBN Man page
expandCountPredicate Source code
fixGenes Man page Source code
generateCanalyzing Man page Source code
generateInteraction Source code
generateNestedCanalyzing Man page Source code
generateRandomNKNetwork Man page Source code
generateRandomStartStates Source code
generateState Man page Source code
generateTimeSeries Man page Source code
getAttractorSequence Man page Source code
getAttractors Man page
getBasinOfAttraction Man page Source code
getDNF Source code
getInputs Source code
getInteractionString Source code
getPathToAttractor Man page Source code
getStateSummary Man page Source code
getTransitionProbabilities Man page Source code
getTransitionTable Man page Source code
igf Man page
indent Source code
kullbackLeiblerDistance Source code
listadapt Source code
loadBioTapestry Man page Source code
loadNetwork Man page Source code
loadSBML Man page Source code
markovSimulation Man page Source code
matchNames Source code
maxTimeDelay Source code
parseAllGenes Source code
parseAllLinks Source code
parseBooleanFunction Source code
parseGeneAttrs Source code
parseMathML Source code
parseSBMLFunctionTerms Source code
parseSBMLSpecies Source code
parseSBMLTransitions Source code
perturbNetwork Man page Source code
perturbTrajectories Man page Source code
plotAttractors Man page
plotNetworkWiring Man page Source code
plotPBNTransitions Man page Source code
plotSequence Man page
plotStateGraph Man page Source code
print.AttractorInfo Man page Source code
print.BooleanNetwork Man page Source code
print.BooleanNetworkCollection Man page Source code
print.BooleanStateInfo Man page Source code
print.MarkovSimulation Man page Source code
print.ProbabilisticBooleanNetwork Man page Source code
print.SymbolicBooleanNetwork Source code
print.SymbolicSimulation Man page Source code
print.TransitionTable Man page Source code
printSynchronousAttractor Source code
pval Source code
qzeta Source code
reconstructNetwork Man page Source code
rzeta Source code
saveNetwork Man page Source code
scan Source code
scanStatistic Source code
sequenceToLaTeX Man page Source code
sequenceToLaTeX.BooleanNetwork Man page
sequenceToLaTeX.data.frame Man page
simplifyNetwork Man page Source code
simulateSymbolicModel Man page Source code
stateTransition Man page Source code
stringFromParseTree Source code
symbolicToTruthTable Man page Source code
testAttractorRobustness Man page Source code
testIndegree Man page Source code
testNetworkProperties Man page Source code
testTransitionRobustness Man page Source code
toPajek Man page
toSBML Man page Source code
trim Source code
truthTableToSymbolic Man page Source code
xmlFindNode Source code
yeastTimeSeries Man page
BoolNet documentation built on May 2, 2019, 2:51 p.m.