plot_interactive: plot_interactive
In CIARA: Cluster Independent Algorithm for Rare Cell Types Identification

plot_interactive

R Documentation

plot_interactive

It shows in an interactive plot which are the highly localized genes in each cell. It is based on plotly library

plot_interactive(
  coordinate_umap,
  color,
  text,
  min_x = NULL,
  max_x = NULL,
  min_y = NULL,
  max_y = NULL
)

`coordinate_umap`	Data frame with dimensionality reduction coordinates. Number of rows must be equal to the number of cells
`color`	vector of length equal to n_rows in coordinate_umap.Each cell will be coloured following a gradient according to the corresponding value of this vector.
`text`	Character vector specifying the highly localized genes in each cell. It is the output from selection_localized_genes.
`min_x`	Set the min limit on the x axis.
`max_x`	Set the max limit on the x axis.
`min_y`	Set the min limit on the y axis.
`max_y`	Set the min limit on the y axis.

plotly object given by plot_ly function (from library plotly).