API for CNOGpro
Copy Numbers of Genes in prokaryotes

Global functions
CNOGpro	Man page Source code
CNOGpro-package	Man page
HMMcopynumber	Man page Source code
addState	Man page Source code
calculateProb	Man page Source code
carsonella	Man page
copynumberBootstrap	Man page Source code
getGCinwindows	Man page Source code
getMembership	Man page Source code
gethits	Man page Source code
getreadcounts	Man page Source code
getsequence	Man page Source code
insertRow	Man page Source code
isbetween	Man page Source code
makeViterbimat	Man page Source code
normalizeGC	Man page Source code
plotCNOGpro	Man page Source code
printCNOGpro	Man page Source code
readGenBank	Man page Source code
rgammapois	Man page Source code
runBootstrap	Man page Source code
runHMM	Man page Source code
sampleChromosome	Man page Source code
setupEmissionMatrix	Man page Source code
setupTransitionMatrix	Man page Source code
solvePR	Man page Source code
spans	Man page Source code
store	Man page Source code
summaryCNOGpro	Man page Source code
updateGeneTable	Man page Source code