Files in CNOGpro

Copy Numbers of Genes in prokaryotes

MD5

DESCRIPTION

NAMESPACE

inst/extdata/carsonellahits.tab

inst/extdata/CP003467.gbk

R/spans.R R/solvePR.R R/normalizeGC.R R/makeViterbimat.R R/getMembership.R R/getreadcounts.R R/getGCinwindows.R R/sampleChromosome.R R/summaryCNOGpro.R R/getsequence.R R/rgammapois.R R/copynumberBootstrap.R R/gethits.R R/updateGeneTable.R R/calculateProb.R R/insertRow.R R/addState.R R/setupTransitionMatrix.R R/runBootstrap.R R/setupEmissionMatrix.R R/store.R R/readGenBank.R R/plotCNOGpro.R R/CNOGpro-internal.R R/printCNOGpro.R R/runHMM.R R/HMMcopynumber.R R/isbetween.R R/CNOGpro.R man/store.Rd man/normalizeGC.Rd man/runBootstrap.Rd man/CNOGpro-package.Rd man/CNOGpro-internal.Rd man/carsonella.Rd man/CNOGpro.Rd man/runHMM.Rd man/summaryCNOGpro.Rd man/plotCNOGpro.Rd man/printCNOGpro.Rd

data/carsonella.rda

CNOGpro documentation built on May 2, 2019, 5:57 a.m.